TACC: Starting up job 4244477
TACC: Starting parallel tasks...
Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks.
We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node).
___ __ ____ ___ ____ ____ __
/ __) /__\ ( _ \ / __)( ___)(_ _)___ /. |
( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _)
\___/(__)(__)(____/ \___/(____) (__) (_)
This is Gadget, version 4.0.
Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200
Code was compiled with the following compiler and flags:
mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc
Code was compiled with the following settings:
DOUBLEPRECISION=1
FOF
FOF_GROUP_MIN_LEN=32
FOF_LINKLENGTH=0.2
FOF_PRIMARY_LINK_TYPES=2
FOF_SECONDARY_LINK_TYPES=1+16+32
GADGET2_HEADER
IDS_64BIT
NTYPES=6
PERIODIC
PMGRID=128
SELFGRAVITY
SUBFIND
Running on 432 MPI tasks.
BEGRUN: Size of particle structure 136 [bytes]
BEGRUN: Size of sph particle structure 192 [bytes]
BEGRUN: Size of gravity tree node 104 [bytes]
BEGRUN: Size of neighbour tree node 192 [bytes]
BEGRUN: Size of subfind auxiliary data 104 [bytes]
-------------------------------------------------------------------------------------------------------------------------
AvailMem: Largest = 186310.34 Mb (on task= 270), Smallest = 186198.77 Mb (on task= 297), Average = 186281.65 Mb
Total Mem: Largest = 191386.89 Mb (on task= 108), Smallest = 191386.89 Mb (on task= 0), Average = 191386.89 Mb
Committed_AS: Largest = 5188.12 Mb (on task= 297), Smallest = 5076.55 Mb (on task= 270), Average = 5105.24 Mb
SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb
SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb
AllocMem: Largest = 5188.12 Mb (on task= 297), Smallest = 5076.55 Mb (on task= 270), Average = 5105.24 Mb
avail /dev/shm: Largest = 95257.31 Mb (on task= 297), Smallest = 95257.24 Mb (on task= 30), Average = 95257.29 Mb
-------------------------------------------------------------------------------------------------------------------------
Task=0 has the maximum commited memory and is host: c203-034.frontera.tacc.utexas.edu
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Obtaining parameters from file 'param.txt':
InitCondFile lcdm_gas_littleendian.dat
OutputDir output
SnapshotFileBase snap
OutputListFilename outputs_lcdm_gas.txt
ICFormat 3
SnapFormat 3
TimeLimitCPU 180000
CpuTimeBetRestartFile 7200
MaxMemSize 3000
TimeBegin 0.0909091
TimeMax 1
ComovingIntegrationOn 1
Omega0 0.2814
OmegaLambda 0.7186
OmegaBaryon 0.0464
HubbleParam 0.697
Hubble 0.1
BoxSize 400000
OutputListOn 0
TimeBetSnapshot 1.83842
TimeOfFirstSnapshot 0.047619
TimeBetStatistics 0.05
NumFilesPerSnapshot 1
MaxFilesWithConcurrentIO 1
ErrTolIntAccuracy 0.012
CourantFac 0.15
MaxSizeTimestep 0.025
MinSizeTimestep 0
TypeOfOpeningCriterion 1
ErrTolTheta 0.9
ErrTolThetaMax 1
ErrTolForceAcc 0.0025
TopNodeFactor 2.5
ActivePartFracForNewDomainDecomp 0.01
DesNumNgb 64
MaxNumNgbDeviation 3
UnitLength_in_cm 3.08568e+21
UnitMass_in_g 1.989e+43
UnitVelocity_in_cm_per_s 100000
GravityConstantInternal 0
DesLinkNgb 20
SofteningComovingClass0 1.5
SofteningComovingClass1 1.5
SofteningComovingClass2 1.5
SofteningComovingClass3 1.5
SofteningComovingClass4 1.5
SofteningComovingClass5 1.5
SofteningMaxPhysClass0 1.5
SofteningMaxPhysClass1 1.5
SofteningMaxPhysClass2 1.5
SofteningMaxPhysClass3 1.5
SofteningMaxPhysClass4 1.5
SofteningMaxPhysClass5 1.5
SofteningClassOfPartType0 0
SofteningClassOfPartType1 0
SofteningClassOfPartType2 0
SofteningClassOfPartType3 0
SofteningClassOfPartType4 0
SofteningClassOfPartType5 0
ArtBulkViscConst 1
MinEgySpec 0
InitGasTemp 1000
MALLOC: Allocation of shared memory took 15.7186 sec
BEGRUN: Hubble (internal units) = 0.1
BEGRUN: h = 0.697
BEGRUN: G (internal units) = 43018.7
BEGRUN: UnitMass_in_g = 1.989e+43
BEGRUN: UnitLenth_in_cm = 3.08568e+21
BEGRUN: UnitTime_in_s = 3.08568e+16
BEGRUN: UnitVelocity_in_cm_per_s = 100000
BEGRUN: UnitDensity_in_cgs = 6.76991e-22
BEGRUN: UnitEnergy_in_cgs = 1.989e+53
READIC: filenr=0, 'output/snap_086.hdf5' contains:
READIC: Type 0 (gas): 63921129 (tot= 63921129) masstab= 0
READIC: Type 1: 66646925 (tot= 66646925) masstab= 0
READIC: Type 2: 0 (tot= 0) masstab= 0
READIC: Type 3: 0 (tot= 0) masstab= 0
READIC: Type 4: 3258984 (tot= 3258984) masstab= 0
READIC: Type 5: 81 (tot= 81) masstab= 0
READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 431.
READIC: reading block 0 (Coordinates)...
READIC: reading block 1 (Velocities)...
READIC: reading block 2 (ParticleIDs)...
READIC: reading block 3 (Masses)...
READIC: reading block 4 (InternalEnergy)...
READIC: reading block 5 (Density)...
Dataset Density not present for particle type 0, using zero.
READIC: reading block 6 (SmoothingLength)...
Dataset SmoothingLength not present for particle type 0, using zero.
READIC: reading done. Took 4.54961 sec, total size 6369.96 MB, corresponds to effective I/O rate of 1400.11 MB/sec
READIC: Total number of particles : 133827119
INIT: Testing ID uniqueness...
INIT: success. took=0.0669869 sec
DOMAIN: Begin domain decomposition (sync-point 0).
DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4
DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104
DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352
DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576
DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488
DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034
DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145
DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988
DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585
DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836
DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287
DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373
DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385
DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423
DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499
DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487
DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333
DOMAIN: NTopleaves=18166, determination of top-level tree involved 7 iterations and took 0.646146 sec
DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16
DOMAIN: total_cost=4 total_load=2
DOMAIN: best solution found after 1 iterations by task=201 for nextra=122, reaching maximum imbalance of 1.13474|1.13557
DOMAIN: combining multiple-domains took 0.0133002 sec
DOMAIN: exchange of 69905990 particles
DOMAIN: particle exchange done. (took 0.329518 sec)
DOMAIN: domain decomposition done. (took in total 0.999572 sec)
PEANO: Begin Peano-Hilbert order...
PEANO: done, took 0.0750093 sec.
INIT: Converting u -> entropy All.cf_a3inv=729
FOF: Begin to compute FoF group catalogue... (presently allocated=172.367 MB)
FOF: Comoving linking length: 11.3647
FOFTREE: Ngb-tree construction done. took 0.160813 sec <numnodes>=50539.2 NTopnodes=20761 NTopleaves=18166
FOF: Start linking particles (presently allocated=189.193 MB)
FOF: linking of small cells took 0.00183802 sec
FOF: local links done (took 0.253149 sec, avg-work=0.219143, imbalance=1.14785).
FOF: Marked=204730 out of the 66646925 primaries which are linked
FOF: begin linking across processors (presently allocated=190.967 MB)
FOF: have done 5073 cross links (processed 204730, took 0.0103035 sec)
FOF: have done 2124 cross links (processed 89629, took 0.00553881 sec)
FOF: have done 450 cross links (processed 15820, took 0.00513085 sec)
FOF: have done 111 cross links (processed 2636, took 0.00487794 sec)
FOF: have done 32 cross links (processed 618, took 0.00482026 sec)
FOF: have done 5 cross links (processed 125, took 0.00470169 sec)
FOF: have done 2 cross links (processed 14, took 0.00471096 sec)
FOF: have done 1 cross links (processed 3, took 0.00465067 sec)
FOF: have done 0 cross links (processed 2, took 0.0046234 sec)
FOF: Local groups found.
FOF: primary group finding took = 0.315341 sec
FOF: Start finding nearest dm-particle (presently allocated=189.193 MB)
FOF: fof-nearest iteration 1: need to repeat for 62204835 particles. (took = 0.137994 sec)
FOF: fof-nearest iteration 2: need to repeat for 46898793 particles. (took = 0.164627 sec)
FOF: fof-nearest iteration 3: need to repeat for 22962206 particles. (took = 0.165804 sec)
FOF: fof-nearest iteration 4: need to repeat for 4710323 particles. (took = 0.107987 sec)
FOF: fof-nearest iteration 5: need to repeat for 364823 particles. (took = 0.0294416 sec)
FOF: fof-nearest iteration 6: need to repeat for 6668 particles. (took = 0.00485983 sec)
FOF: done finding nearest dm-particle
FOF: attaching gas and star particles to nearest dm particles took = 0.619326 sec
FOF: compiling local group data and catalogue took = 0.0258937 sec
FOF: Total number of FOF groups with at least 32 particles: 45392
FOF: Largest FOF group has 3091 particles.
FOF: Total number of particles in FOF groups: 133827119
FOF: group properties are now allocated.. (presently allocated=177.442 MB)
FOF: computation of group properties took = 0.00708982 sec
FOF: start assigning group numbers
FOF: Assigning of group numbers took = 0.0701524 sec
FOF: Finished computing FoF groups. Complete work took 1.24373 sec (presently allocated=172.407 MB)
SUBFIND: We now execute a parallel version of SUBFIND.
TREE: Full tree construction for all particles. (presently allocated=176.129 MB)
GRAVTREE: Tree construction done. took 0.666072 sec <numnodes>=77052.3 NTopnodes=20761 NTopleaves=18166 tree-build-scalability=0.731183
SUBFIND: finding total densities around all particles
SUBFIND: ngb iteration 1: need to repeat for 132829864 particles. (took 4.06506 sec)
SUBFIND: ngb iteration 2: need to repeat for 130898755 particles. (took 3.49877 sec)
SUBFIND: ngb iteration 3: need to repeat for 127137397 particles. (took 3.06407 sec)
SUBFIND: ngb iteration 4: need to repeat for 120057104 particles. (took 2.67429 sec)
SUBFIND: ngb iteration 5: need to repeat for 109800212 particles. (took 2.33235 sec)
SUBFIND: ngb iteration 6: need to repeat for 99046549 particles. (took 2.01473 sec)
SUBFIND: ngb iteration 7: need to repeat for 89372915 particles. (took 1.76375 sec)
SUBFIND: ngb iteration 8: need to repeat for 80938781 particles. (took 1.5893 sec)
SUBFIND: ngb iteration 9: need to repeat for 73269632 particles. (took 1.48331 sec)
SUBFIND: ngb iteration 10: need to repeat for 65662458 particles. (took 1.39963 sec)
SUBFIND: ngb iteration 11: need to repeat for 57477391 particles. (took 1.3184 sec)
SUBFIND: ngb iteration 12: need to repeat for 48482953 particles. (took 1.21382 sec)
SUBFIND: ngb iteration 13: need to repeat for 38967743 particles. (took 1.08076 sec)
SUBFIND: ngb iteration 14: need to repeat for 29556045 particles. (took 0.910163 sec)
SUBFIND: ngb iteration 15: need to repeat for 20749737 particles. (took 0.709366 sec)
SUBFIND: ngb iteration 16: need to repeat for 13128829 particles. (took 0.502606 sec)
SUBFIND: ngb iteration 17: need to repeat for 7354807 particles. (took 0.322782 sec)
SUBFIND: ngb iteration 18: need to repeat for 3681417 particles. (took 0.189612 sec)
SUBFIND: ngb iteration 19: need to repeat for 1700124 particles. (took 0.104052 sec)
SUBFIND: ngb iteration 20: need to repeat for 767569 particles. (took 0.0577679 sec)
SUBFIND: ngb iteration 21: need to repeat for 363250 particles. (took 0.0328894 sec)
SUBFIND: ngb iteration 22: need to repeat for 184853 particles. (took 0.0203679 sec)
SUBFIND: ngb iteration 23: need to repeat for 95285 particles. (took 0.0125084 sec)
SUBFIND: ngb iteration 24: need to repeat for 45562 particles. (took 0.00758991 sec)
SUBFIND: ngb iteration 25: need to repeat for 18851 particles. (took 0.00460003 sec)
SUBFIND: ngb iteration 26: need to repeat for 6552 particles. (took 0.00303339 sec)
SUBFIND: ngb iteration 27: need to repeat for 1810 particles. (took 0.00202239 sec)
SUBFIND: ngb iteration 28: need to repeat for 365 particles. (took 0.00115616 sec)
SUBFIND: ngb iteration 29: need to repeat for 41 particles. (took 0.000571571 sec)
SUBFIND: ngb iteration 30: need to repeat for 3 particles. (took 0.000265311 sec)
SUBFIND: iteration to correct primary neighbor count and density estimate took 30.3881 sec
SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0
SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0
SUBFIND: (The adopted size-limit for the collective algorithm was 133827119 particles, for threshold size factor 0.6)
SUBFIND: The other 45392 FOF halos are treated in parallel with serial code
SUBFIND: subfind_distribute_groups() took 0.00122861 sec
SUBFIND: particle balance=1.13451
SUBFIND: subfind_exchange() took 0.478214 sec
SUBFIND: particle balance for processing=1.00887
SUBFIND: subdomain decomposition took 0.104156 sec
SUBFIND: serial subfind subdomain decomposition took 0.104335 sec
SUBFIND: subfind_hbt_single_group() processing for Ngroups=106 took 11.3364 sec
SUBFIND: root-task=0: Serial processing of halo 0 took 11.5932
SUBFIND: Processing overall took (total time=11.7498 sec)
SUBFIND: 0 out of 161438 decisions, fraction 0, where influenced by previous subhalo size
ALLOCATE: Changing to MaxPart = 516311
ALLOCATE: Changing to MaxPartSph = 246610
SUBFIND: subfind_exchange() (for return to original CPU) took 0.542744 sec
TREE: Full tree construction for all particles. (presently allocated=159.988 MB)
GRAVTREE: Tree construction done. took 1.42273 sec <numnodes>=77052.3 NTopnodes=20761 NTopleaves=18166 tree-build-scalability=0.731183
SUBFIND: SO iteration 1: need to repeat for 45392 halo centers. (took 0.00769518 sec)
SUBFIND: SO iteration 2: need to repeat for 45392 halo centers. (took 0.00726692 sec)
SUBFIND: SO iteration 3: need to repeat for 45392 halo centers. (took 0.00669869 sec)
SUBFIND: SO iteration 4: need to repeat for 45392 halo centers. (took 0.00640285 sec)
SUBFIND: SO iteration 5: need to repeat for 45392 halo centers. (took 0.00631449 sec)
SUBFIND: SO iteration 6: need to repeat for 45392 halo centers. (took 0.00646807 sec)
SUBFIND: SO iteration 7: need to repeat for 45392 halo centers. (took 0.00621289 sec)
SUBFIND: SO iteration 8: need to repeat for 45392 halo centers. (took 0.00620241 sec)
SUBFIND: SO iteration 9: need to repeat for 45392 halo centers. (took 0.00615388 sec)
SUBFIND: SO iteration 10: need to repeat for 45392 halo centers. (took 0.00616527 sec)
SUBFIND: SO iteration 11: need to repeat for 45392 halo centers. (took 0.00615157 sec)
SUBFIND: SO iteration 12: need to repeat for 45392 halo centers. (took 0.0061634 sec)
SUBFIND: SO iteration 13: need to repeat for 45392 halo centers. (took 0.00614965 sec)
SUBFIND: SO iteration 14: need to repeat for 45392 halo centers. (took 0.00617137 sec)
SUBFIND: SO iteration 15: need to repeat for 45392 halo centers. (took 0.00620103 sec)
SUBFIND: SO iteration 16: need to repeat for 674 halo centers. (took 0.00614001 sec)
SUBFIND: SO iteration 1: need to repeat for 45392 halo centers. (took 0.00607348 sec)
SUBFIND: SO iteration 2: need to repeat for 45392 halo centers. (took 0.00587206 sec)
SUBFIND: SO iteration 3: need to repeat for 45392 halo centers. (took 0.00595587 sec)
SUBFIND: SO iteration 4: need to repeat for 45392 halo centers. (took 0.00596667 sec)
SUBFIND: SO iteration 5: need to repeat for 45392 halo centers. (took 0.00600502 sec)
SUBFIND: SO iteration 6: need to repeat for 45392 halo centers. (took 0.00603742 sec)
SUBFIND: SO iteration 7: need to repeat for 45392 halo centers. (took 0.00603092 sec)
SUBFIND: SO iteration 8: need to repeat for 45392 halo centers. (took 0.00599023 sec)
SUBFIND: SO iteration 9: need to repeat for 45392 halo centers. (took 0.00602868 sec)
SUBFIND: SO iteration 10: need to repeat for 45392 halo centers. (took 0.00602476 sec)
SUBFIND: SO iteration 11: need to repeat for 45392 halo centers. (took 0.00601969 sec)
SUBFIND: SO iteration 12: need to repeat for 45392 halo centers. (took 0.0059984 sec)
SUBFIND: SO iteration 13: need to repeat for 45392 halo centers. (took 0.00599283 sec)
SUBFIND: SO iteration 14: need to repeat for 45392 halo centers. (took 0.00602155 sec)
SUBFIND: SO iteration 15: need to repeat for 45392 halo centers. (took 0.00599027 sec)
SUBFIND: SO iteration 16: need to repeat for 353 halo centers. (took 0.00600433 sec)
SUBFIND: SO iteration 1: need to repeat for 45392 halo centers. (took 0.00604587 sec)
SUBFIND: SO iteration 2: need to repeat for 45392 halo centers. (took 0.00678518 sec)
SUBFIND: SO iteration 3: need to repeat for 45392 halo centers. (took 0.00653291 sec)
SUBFIND: SO iteration 4: need to repeat for 45392 halo centers. (took 0.00624026 sec)
SUBFIND: SO iteration 5: need to repeat for 45392 halo centers. (took 0.00615073 sec)
SUBFIND: SO iteration 6: need to repeat for 45392 halo centers. (took 0.00610285 sec)
SUBFIND: SO iteration 7: need to repeat for 45392 halo centers. (took 0.00611651 sec)
SUBFIND: SO iteration 8: need to repeat for 45392 halo centers. (took 0.00615355 sec)
SUBFIND: SO iteration 9: need to repeat for 45392 halo centers. (took 0.0061261 sec)
SUBFIND: SO iteration 10: need to repeat for 45392 halo centers. (took 0.00612412 sec)
SUBFIND: SO iteration 11: need to repeat for 45392 halo centers. (took 0.00628588 sec)
SUBFIND: SO iteration 12: need to repeat for 45392 halo centers. (took 0.00612577 sec)
SUBFIND: SO iteration 13: need to repeat for 45392 halo centers. (took 0.00611631 sec)
SUBFIND: SO iteration 14: need to repeat for 45392 halo centers. (took 0.00613521 sec)
SUBFIND: SO iteration 15: need to repeat for 45392 halo centers. (took 0.00613086 sec)
SUBFIND: SO iteration 16: need to repeat for 682 halo centers. (took 0.00610243 sec)
SUBFIND: SO iteration 1: need to repeat for 45392 halo centers. (took 0.00605196 sec)
SUBFIND: SO iteration 2: need to repeat for 45392 halo centers. (took 0.00707573 sec)
SUBFIND: SO iteration 3: need to repeat for 45392 halo centers. (took 0.00652638 sec)
SUBFIND: SO iteration 4: need to repeat for 45392 halo centers. (took 0.00682262 sec)
SUBFIND: SO iteration 5: need to repeat for 45392 halo centers. (took 0.00674504 sec)
SUBFIND: SO iteration 6: need to repeat for 45392 halo centers. (took 0.00676269 sec)
SUBFIND: SO iteration 7: need to repeat for 45392 halo centers. (took 0.00672437 sec)
SUBFIND: SO iteration 8: need to repeat for 45392 halo centers. (took 0.00676089 sec)
SUBFIND: SO iteration 9: need to repeat for 45392 halo centers. (took 0.00672237 sec)
SUBFIND: SO iteration 10: need to repeat for 45392 halo centers. (took 0.00671255 sec)
SUBFIND: SO iteration 11: need to repeat for 45392 halo centers. (took 0.00672371 sec)
SUBFIND: SO iteration 12: need to repeat for 45392 halo centers. (took 0.00677079 sec)
SUBFIND: SO iteration 13: need to repeat for 45392 halo centers. (took 0.00675779 sec)
SUBFIND: SO iteration 14: need to repeat for 45392 halo centers. (took 0.00693347 sec)
SUBFIND: SO iteration 15: need to repeat for 45392 halo centers. (took 0.00675766 sec)
SUBFIND: SO iteration 16: need to repeat for 25368 halo centers. (took 0.00687916 sec)
SUBFIND: SO iteration 17: need to repeat for 139 halo centers. (took 0.00432239 sec)
SUBFIND: determining spherical overdensity masses took 0.412034 sec
SUBFIND: assembled and ordered groups and subhalos (took 0.0575444 sec)
FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1)
FOF/SUBFIND: writing group catalogue block 0 (GroupLen)...
FOF/SUBFIND: writing group catalogue block 1 (GroupMass)...
FOF/SUBFIND: writing group catalogue block 2 (GroupPos)...
FOF/SUBFIND: writing group catalogue block 3 (GroupVel)...
FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)...
FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)...
FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)...
FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)...
FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)...
FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)...
FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)...
FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)...
FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)...
FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)...
FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)...
FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)...
FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)...
FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)...
FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)...
FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)...
FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)...
FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)...
FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)...
FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)...
FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)...
FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)...
FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)...
FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)...
FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)...
FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)...
FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)...
FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)...
FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)...
FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)...
FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)...
FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)...
FOF/SUBFIND: Group catalogues saved. took = 0.934598 sec, total size 49.5508 MB, corresponds to effective I/O rate of 53.0182 MB/sec
SUBFIND: Subgroup catalogues saved. took = 0.935408 sec
SUBFIND: Finished with SUBFIND. (total time=46.7271 sec)
SUBFIND: Total number of subhalos with at least 20 particles: 203559
SUBFIND: Largest subhalo has 3091 particles/cells.
SUBFIND: Total number of particles/cells in subhalos: 133827119
FOF: preparing output order of particles took 1.38468 sec
SNAPSHOT: writing snapshot file #86 @ time 0.111111 ...
SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1)
SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5'
SNAPSHOT: writing snapshot block 0 (Coordinates)...
SNAPSHOT: writing snapshot block 1 (Velocities)...
SNAPSHOT: writing snapshot block 2 (ParticleIDs)...
SNAPSHOT: writing snapshot block 3 (Masses)...
SNAPSHOT: writing snapshot block 4 (InternalEnergy)...
SNAPSHOT: writing snapshot block 5 (Density)...
SNAPSHOT: writing snapshot block 6 (SmoothingLength)...
SNAPSHOT: done with writing snapshot. Took 8.18041 sec, total size 5326.11 MB, corresponds to effective I/O rate of 651.081 MB/sec
endrun called, calling MPI_Finalize()
bye!
Abort(806969615) on node 237 (rank 237 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack:
PMPI_Finalize(214)...............: MPI_Finalize failed
PMPI_Finalize(159)...............:
MPID_Finalize(1288)..............:
MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy)
Abort(806969615) on node 241 (rank 241 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack:
PMPI_Finalize(214)...............: MPI_Finalize failed
PMPI_Finalize(159)...............:
MPID_Finalize(1288)..............:
MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy)
TACC: MPI job exited with code: 15
TACC: Shutdown complete. Exiting.